Commit graph

161 commits

Author SHA1 Message Date
e08248a15c docs: Add status note for planned cross-genome references skill 2026-06-19 05:49:41 +02:00
1788c40ad1 docs: Detail duplicate-slug advisory in AI ingest linting process 2026-06-19 05:49:41 +02:00
6615d9b1d6 docs: Clarify genome naming convention and registry setup in README 2026-06-19 05:49:41 +02:00
5491e807e0 docs: Clarify ingest pipeline roles and automation 2026-06-19 05:47:26 +02:00
593819451e docs: Update tests README for duplicate slug advisory 2026-06-19 05:45:06 +02:00
8e4f0386c6 test: Add comprehensive tests for duplicate slug advisory and helpers 2026-06-19 05:45:06 +02:00
a843c30a9e feat: Integrate duplicate slug advisory into ingest linting workflow 2026-06-19 05:45:06 +02:00
f703498fd9 feat: Add Levenshtein distance, string similarity, and duplicate slug advisory 2026-06-19 05:45:06 +02:00
b808f0fc8f refactor: Update script header documentation and remove outdated comments 2026-06-19 05:41:53 +02:00
91e443ad16 feat: Enhance AI model prompt and schema for richer content and de-duplication 2026-06-19 05:41:53 +02:00
cdab1e089e feat: Implement shared page generation helpers and frontmatter title support 2026-06-19 05:41:53 +02:00
ed63895fea Merge branch 'release/1.3.0' into develop 2026-06-18 15:28:19 +02:00
b7b5da0c3b Update version 2026-06-18 15:28:05 +02:00
e396bc93e2 refactor(ingest): Update run-ingest.sh for new semantic pipeline 2026-06-18 15:27:02 +02:00
fdd7e1e92b feat(ingest): Implement 'light' semantic ingest with ingest-semantic.py 2026-06-18 15:27:02 +02:00
d207a0fc91 Merge branch 'release/1.2.5' into develop 2026-06-12 17:39:41 +02:00
2c2318936d Update version 2026-06-12 17:38:57 +02:00
80c5cc753f chore: Prevent empty commits when registering submodules 2026-06-12 17:36:41 +02:00
48c107e59c Merge branch 'release/1.2.4' into develop 2026-06-12 16:18:16 +02:00
5792809333 Update version 2026-06-12 16:18:03 +02:00
a0a12cfa71 refactor: Reorder gcrypt key export and instructions 2026-06-12 16:17:23 +02:00
8f2e7da157 Merge branch 'release/1.2.3' into develop 2026-06-12 16:07:38 +02:00
77d16586ab Update version 2026-06-12 16:07:31 +02:00
009bd83977 fix(pre-commit): Enhance git-crypt check and simplify error output 2026-06-12 16:06:55 +02:00
7dc97bd349 Merge branch 'release/1.2.2' into develop 2026-06-12 12:17:21 +02:00
3e8af163c0 Update version 2026-06-12 12:17:11 +02:00
eeafddbf1a feat: Automatically register new genomes as submodules 2026-06-12 12:16:23 +02:00
813924460d feat: Improve pre-commit hook installation robustness 2026-06-12 12:16:23 +02:00
ec7d3b89cd Merge branch 'release/1.2.1' into develop 2026-06-12 11:47:26 +02:00
ca1943471f Update version 2026-06-12 11:47:15 +02:00
261fdc56bf feat(setup-genomes): Enable auto_init when creating genome repos 2026-06-12 11:46:35 +02:00
6ef9269df1 feat(forgejo): Add auto_init parameter to provider_create_repo 2026-06-12 11:46:35 +02:00
e169c09015 Merge branch 'release/1.2.0' into develop 2026-06-12 11:04:54 +02:00
f24436f583 Update version 2026-06-12 11:04:42 +02:00
fa7b3eed82 chore: General cleanup and minor configuration adjustments 2026-06-12 10:49:10 +02:00
1717752ab3 docs: Update cross-genome linking strategy documentation 2026-06-12 10:49:10 +02:00
6558ee486a feat: Add 'cross_source' property to genome registry 2026-06-12 10:49:10 +02:00
b48c99b0ff feat: Standardize WORK_DIR and master repository interactions 2026-06-12 10:49:10 +02:00
1536262acf Merge branch 'release/1.1.6' into develop 2026-06-11 10:25:21 +02:00
678c203fde Update version 2026-06-11 10:25:11 +02:00
bad41d6313 feat: Introduce cross_source flag for genome registry entries 2026-06-10 17:24:20 +02:00
22239f4bb5 docs(crossgen): Streamline knowledge pull, remove agent synthesis step 2026-06-10 16:52:50 +02:00
351e4a13af Merge branch 'release/1.1.5' into develop 2026-06-09 19:45:31 +02:00
909ee15ffb Version update 2026-06-09 19:45:20 +02:00
d7611a79f4 feat: Prepare for private content handling in ingest and tests 2026-06-09 19:44:28 +02:00
a1d14bd2e1 docs: Add developer notes on code smells and design tradeoffs 2026-06-09 19:44:21 +02:00
516beca43b refactor: Promote lint warnings to errors for critical issues 2026-06-09 19:44:14 +02:00
8fb0890622 feat: Introduce pull-based cross-genome reference mechanism 2026-06-09 19:44:09 +02:00
5ad338c5bf docs: Clarify macOS bash requirements for git-crypt rotation 2026-06-09 19:44:02 +02:00
2669a76711 refactor: Improve git-crypt verification logic 2026-06-09 19:43:56 +02:00