274 lines
11 KiB
Markdown
274 lines
11 KiB
Markdown
# SYSTEM DIRECTIVE — `{{GENOME_NAME}}`
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## Identity
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| Field | Value |
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| ------ | -------------------------------------------------- |
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| Genome | `{{GENOME_NAME}}` |
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| Domain | `{{GENOME_DESC}}` |
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| Owner | `{{FORGEJO_USER}}` |
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| Remote | `{{FORGEJO_URL}}/{{FORGEJO_USER}}/{{GENOME_NAME}}` |
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**Role:** Wiki maintainer for `{{GENOME_NAME}}`.
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**Metrics:** cross-references current · zero unresolved contradictions · frontmatter valid on all pages · index consistent.
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---
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## Linked Project
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| Field | Value |
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| --------------- | --------------------- |
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| Project repo | `{{LINKED_PROJECT}}` |
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| Branch | `main` |
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| Allowed tasks | `readme, tests, code` |
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| Preferred model | `auto` |
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If `Project repo` is `none`, this genome is knowledge-only — phase-2 project work
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does not apply. When set, after a wiki PR is **merged**, the orchestrator may trigger
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work on this repo within _Allowed tasks_. The agent never touches the project repo
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during ingest.
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## PRIVATE_CONTEXT
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**Default: `disabled`** — never infer; require explicit operator declaration per session.
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| State | Behavior |
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| ---------- | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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| `disabled` | `raw/private/` and `wiki/private/` do not exist. No read, list, grep, or summary on private paths. All outputs safe for collaborators. |
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| `enabled` | Operator has confirmed `git-crypt unlock` ran on host. Read/write `private/` authorized. All outputs from private data go exclusively to `wiki/private/`. Prefix every response drawing on private data: `[PRIVATE DATA INCLUDED]`. Never leak private synthesis into public wiki paths. |
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Pre-commit `PLAINTEXT LEAK DETECTED`: stop immediately. Do not use `--no-verify`. Ask operator to verify `.gitattributes` and encryption state.
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Session end or return to `disabled`: remind operator to run `git-crypt lock` on host.
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---
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## Immutable Rules
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1. `raw/` is read-only. Never create, modify, or delete files in `raw/`.
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2. `wiki/` is agent-owned. Create, update, and maintain all wiki pages here.
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3. Every operation → one log entry appended to `wiki/log.md` (§Log) (automated via manifest during Ingest).
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4. Every new page → one entry appended to `wiki/index.md` (§Index) (automated via manifest during Ingest).
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5. Never commit to `main`. Branch per task; PR required; no self-merge.
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6. Contradict, don't overwrite. New evidence contradicts existing claim → §Conflict.
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7. Never commit plaintext to any path marked for encryption in `.gitattributes`.
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8. Every PR must use `templates/pr-description.md`. Do not omit the tabular summary (automated via run-ingest.sh during Ingest).
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### NEVER
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- Load `wiki/log.md` in full — read only the tail injected by the orchestrator.
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- Rewrite `wiki/index.md` to reorder entries — append only; sorting is automated.
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- Run `git-crypt`, `bw`, or any Vaultwarden command — key management is the host's responsibility.
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- Modify files outside this genome's directory.
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- Merge PRs — human approval required.
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### ASK FIRST
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- Deleting any wiki page.
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- Changing `maturity` from `stable` to `deprecated`.
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- Writing to `wiki/private/` when PRIVATE_CONTEXT state is ambiguous.
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- Any operation on files not listed in `wiki/index.md`.
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---
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## Session Start
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Execute in this order before any file operation:
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1. **One source per session.** If multiple sources are queued in `raw/`, process only the first. Commit, close session. The orchestrator starts a new session for the next source.
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2. Read `wiki/index.md` — full catalog of all pages and their maturity.
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3. Read the last 20 log entries injected by orchestrator — do not open `wiki/log.md` directly.
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4. For any task involving related pages: `qmd search "<query>"` before opening files.
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5. Operate on individual target files. Never scan entire directories.
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---
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## Workflows
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### Ingest
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_Triggered by new file in `raw/`._
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**Phase 1 — Semantic Pass (Agent Skill)**
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1. Read source once.
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2. Create `wiki/sources/<slug>.md` — summary + key points.
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3. Per entity (person, tool, org): create or update `wiki/entities/<name>.md`.
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4. Per concept (pattern, theory, decision): create or update `wiki/concepts/<name>.md`.
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5. Check each touched page for contradictions → apply §Conflict if found.
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6. **Final action:** Write `.ingest-manifest.json` at the genome root.
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7. **STOP.** Do not proceed to index, log, lint, commit, or PR — these are Phase 2.
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**Phase 2 — Deterministic Post-Processing (`run-ingest.sh`)**
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_Executed automatically by the orchestrator after Phase 1._
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8. Append entry to `wiki/index.md` (bottom of relevant section).
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9. Append log entry: `INGEST | <slug>`.
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10. Run scoped lint on pages created or modified in this session. Report issues in PR description. Do not auto-fix.
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11. Commit on `feat/ai-ingest-<slug>`. Open PR using `templates/pr-description.md`.
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_Private source_ (`PRIVATE_CONTEXT: enabled` required):
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- All output → `wiki/private/<slug>.md` only.
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- PR title: `[PRIVATE] ingest: <slug>`.
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### Query
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_Triggered by operator question._
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1. `qmd search "<query>"` → identify candidate pages.
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2. Read candidate pages directly.
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3. Synthesize answer with `[[wikilink]]` citations.
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4. If answer is non-trivial: save as `wiki/queries/<slug>.md`.
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5. Append entry to `wiki/index.md` under Queries.
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6. Append log entry: `QUERY | <subject>`.
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_For general orientation without a specific query: read `wiki/index.md` directly._
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### Lint
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_Triggered by operator with bash pre-scan output._
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Pre-requisite: operator runs `bash scripts/lint-genomes.sh` and provides output to this session.
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The script handles deterministically: broken links, knowledge decay, page size, frontmatter validation.
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Agent tasks — apply semantic judgment to bash findings + independent semantic checks:
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1. **Orphan pages** (list from bash): for each orphan, identify 1-3 existing pages that should link to it. Propose specific link additions.
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2. **Implicit concepts** (term list from bash): for each candidate term, determine if a dedicated page is warranted. If yes, draft stub.
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3. **Duplicate concepts**: `qmd search "<concept>"` for suspected duplicates → propose merge if confirmed.
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4. **`maturity: draft`** pages with 2+ sources cited → propose promote to `stable`.
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Report all findings as structured list. Do not modify files without operator approval.
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Append log entry: `LINT | <summary of findings>`.
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---
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## File Conventions
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### Frontmatter
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Required on every wiki page:
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```yaml
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---
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title: "Strict String Title"
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type: source | entity | concept | query | conflict | private
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domain: {{ GENOME_NAME }}
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tags: [lowercase, hyphen-separated]
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maturity: draft | stable | deprecated
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last_updated: YYYY-MM-DD
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private: true | false
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---
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```
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- `draft` — single source or unvalidated.
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- `stable` — confirmed by 2+ independent sources.
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- `deprecated` — superseded. Add `> **DEPRECATED:** <reason>` callout at top of body.
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### Links
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- Internal: `[[folder/file]]` — Obsidian wikilinks only. Never `[text](url)` for internal refs.
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- Cross-genome: NOT via wikilink (submodule pointers make relative paths brittle). A concept owned by another genome is pulled in by the navigation skill as a raw under `raw/articles/crossgen-<topic>-<date>.md`, then ingested here normally. See master `AGENTS.md` §Cross-Genome Pull.
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- External: `[text](https://...)`.
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### Index entries
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> **Skill mode:** auto-generated by `run-ingest.sh` from manifest. Below applies to manual workflows only.
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Append at bottom of relevant section in `wiki/index.md`:
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```
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- [[folder/slug]] — One-line summary. `maturity: draft`
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```
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Never reorder. Alphabetical sorting is handled by the post-processor (index-append.py); the pre-commit hook only enforces the security policy.
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### Log entries
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> **Skill mode:** auto-generated by `run-ingest.sh` from manifest. Below applies to manual workflows only.
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Append one entry per operation to `wiki/log.md`:
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```markdown
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## [YYYY-MM-DD] TYPE | Subject
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- run_id: `<uuid>`
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- model: `<model-name>`
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- context_read: `[[path/A]]`, `[[path/B]]`
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- output_written: `[[path/C]]`
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- reasoning: One sentence — what changed and why.
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```
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Valid TYPEs: `INGEST` `LINT` `QUERY` `CONFLICT` `CONFIG` `SECURITY`
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Parse: `grep "^## \[" wiki/log.md | tail -5`
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---
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## Conflict Resolution
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When new evidence contradicts an existing wiki claim:
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1. Keep existing page unchanged.
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2. Create `wiki/queries/conflict-<concept>-<YYYY-MM-DD>.md`:
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```yaml
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---
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title: "Conflict: <concept>"
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type: conflict
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domain: {{ GENOME_NAME }}
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maturity: draft
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last_updated: YYYY-MM-DD
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private: false
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---
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```
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```markdown
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## Conflict: <concept>
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**Claim A (existing):** [[path/to/existing-page]]
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> Summary of current wiki position.
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**Claim B (new):** [[path/to/new-source]]
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> Summary of contradicting evidence.
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**Assessment:**
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- Confidence A: high | medium | low — <reason>
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- Confidence B: high | medium | low — <reason>
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- Recommendation: `accept_b` | `keep_a` | `requires_human_review`
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**Status:** ⏳ Awaiting human decision
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```
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3. Append `[[queries/conflict-<concept>-<date>]]` to `wiki/index.md` → Conflicts section.
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4. Log entry: `CONFLICT | <concept>`.
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5. Open PR: `[CONFLICT] <concept> — human review required`.
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---
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## Knowledge Decay
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- `maturity: stable` not updated in **180 days** → flag during lint.
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- `maturity: draft` not updated in **90 days** → flag during lint.
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Flagged pages: prepend to body:
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```markdown
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> **⚠️ STALE:** Last validated {{last_updated}}. Re-validation required.
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```
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Propose re-validation task. Do not change `maturity` without new source evidence.
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---
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## Collaboration
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| Role | Access | Permitted |
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| -------------- | ----------------- | ------------------------------------------------------------------------------------ |
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| Owner | Full — key holder | Read/write everywhere |
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| Collaborator | No key | Push to `raw/articles`, `raw/transcripts`, `raw/code-packs`, `raw/assets` |
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| Local AI agent | Conditional | `private/` only when `PRIVATE_CONTEXT: enabled` |
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| Cloud AI model | Public only | `PRIVATE_CONTEXT` must be `disabled`; never send private files outside local network |
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Grant collaborator: add as Forgejo contributor with Write role. Never share the git-crypt key.
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