29 lines
892 B
Bash
29 lines
892 B
Bash
#!/usr/bin/env bash
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# =============================================================================
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# scripts/add-genome.sh
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# Helper to add a single new genome to the existing infrastructure.
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# =============================================================================
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set -euo pipefail
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source "lib/output.sh"
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source "globals.env"
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source "registry.sh"
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GENOME_NAME="${1:-}"
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GENOME_DESC="${2:-}"
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GENOME_LINKED="${3:-}" # optional: linked project repo reference
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if [[ -z "$GENOME_NAME" || -z "$GENOME_DESC" ]]; then
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error "Missing arguments."
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echo "Usage: $0 <genome-name> <description> [linked-repo]"
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exit 1
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fi
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step "Adding New Genome: ${GENOME_NAME}"
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# Build a 3-field registry entry (linked_repo may be empty)
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GENOMES=("${GENOME_NAME}|${GENOME_DESC}|${GENOME_LINKED}")
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source "scripts/setup-genomes.sh"
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success "Genome '${GENOME_NAME}' added and linked successfully!"
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