29 lines
902 B
Bash
29 lines
902 B
Bash
#!/usr/bin/env bash
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# =============================================================================
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# scripts/add-genome.sh
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# Helper to add a single new genome to the existing infrastructure.
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# Usage: make add-genome NAME=my-new-genome DESC="Description here"
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# =============================================================================
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set -euo pipefail
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source "lib/output.sh"
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source "config.env"
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GENOME_NAME="${1:-}"
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GENOME_DESC="${2:-}"
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if [[ -z "$GENOME_NAME" || -z "$GENOME_DESC" ]]; then
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error "Missing arguments."
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echo "Usage: $0 <genome-name> <description>"
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exit 1
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fi
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step "Adding New Genome: ${GENOME_NAME}"
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# Overwrite the GENOMES array for this session to process only the new one
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export GENOMES=("${GENOME_NAME}|${GENOME_DESC}")
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# Trigger the standard genome setup logic
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bash "scripts/setup-genomes.sh"
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success "Genome '${GENOME_NAME}' added and linked successfully!"
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