#!/usr/bin/env bash
# diagnose-run-ingest.sh
# Run from the repo root:  bash diagnose-run-ingest.sh
# Builds the same fixture the bats test uses and runs run-ingest under `bash -x`
# so we can see exactly which command makes it exit non-zero.

set -uo pipefail

REPO="$(pwd)"
RI="${REPO}/skills/ingest/scripts/run-ingest.sh"

echo "==================== ENV ===================="
echo "bash: $(bash --version | head -1)"
echo "git : $(git --version)"
echo "jq  : $(jq --version 2>/dev/null || echo MISSING)"
echo "py  : $(python3 --version 2>/dev/null || echo MISSING)"
echo

echo "============ run-ingest.sh on disk ============"
if [[ ! -f "$RI" ]]; then echo "NOT FOUND: $RI (run me from the repo root)"; exit 1; fi
echo "-- helper invocations (want 'bash ...'): --"
grep -nE 'log-append\.sh|scoped-lint\.sh|open-pr\.sh' "$RI"
echo "-- result emitter (want 'jq -nc'): --"
grep -nE 'jq -nc?|jq -n ' "$RI"
echo

echo "============ build hermetic fixture ============"
T="$(mktemp -d)"
mkdir -p "$T/nohooks"
git init --bare -q "$T/origin.git"
g="$T/g"
mkdir -p "$g"/{raw/articles,wiki/sources,wiki/entities,wiki/concepts,wiki/queries,wiki/private}

cat > "$g/wiki/index.md" <<'EOF'
---
title: "Index"
type: index
domain: genome-test
maturity: stable
last_updated: 2026-01-01
private: false
---

# Index

---

## Sources (`wiki/sources/`)
*x*


## Entities (`wiki/entities/`)
*x*


## Concepts (`wiki/concepts/`)
*x*


## Queries (`wiki/queries/`)
*x*


## Conflicts Pending Review (`wiki/queries/conflict-*.md`)
*x*
EOF

cat > "$g/wiki/log.md" <<'EOF'
---
title: "Log"
type: log
domain: genome-test
maturity: stable
last_updated: 2026-01-01
private: false
---

# Log

---

## [2026-01-01] CONFIG | init
- run_id: `init`
EOF

echo raw > "$g/raw/articles/test.md"

(
  cd "$g"
  git init -q
  git config commit.gpgsign false
  git config core.hooksPath "$T/nohooks"
  git config user.email t@t
  git config user.name t
  git add .
  git commit -qm init
  git branch -M main
  git remote add origin "$T/origin.git"
  git push -q -u origin main
) && echo "fixture commit+push OK" || echo "FIXTURE SETUP FAILED (look above)"

cat > "$g/wiki/sources/test-source.md" <<'EOF'
---
title: "Test Source"
type: source
domain: genome-test
tags: [t]
maturity: draft
last_updated: 2026-06-04
private: false
---
body
EOF

cat > "$g/.ingest-manifest.json" <<'EOF'
{ "raw_source":"raw/articles/test.md","model":"m","reasoning":"r","pr_summary":"s","contradictions":"None",
  "pages":[{"path":"wiki/sources/test-source.md","summary":"a source","maturity":"draft","status":"created"}] }
EOF

echo
echo "============ run-ingest (bash -x) ============"
cd "$g"
export KG_LIB_DIR="${REPO}/lib" FORGEJO_URL=http://x FORGEJO_USER=u FORGEJO_TOKEN=t DRY_RUN=1
bash -x "$RI" genome-test >"$T/out.txt" 2>"$T/trace.txt"
rc=$?
echo "EXIT=$rc"
echo "-- run-ingest stdout (final JSON should be here): --"
cat "$T/out.txt"
echo "-- last 25 lines of the trace (the failing command is near the end): --"
tail -n 25 "$T/trace.txt"